Zones of maximum discontinuity in the western house mouse (M. m. domesticus) genetic landscape: a computational geometry method.

Authors

  • Fatah Zarei Graduate Student of Systematic Zoology, Faculty of Biological Sciences, Shahid Beheshti University, Tehran, Iran. Author
  • Ridha H. Hussein Zoology Assistant Professor, Department of Biology, School of Science, University of Sulaimani, Kurdistan Region, Iraq. Author

DOI:

https://doi.org/10.17656/jzs.10526

Keywords:

BARRIER analysis, Genetic discontinuity, Monmonier’s algorithm, Western house mouse

Abstract

To represent the zones of maximum genetic discontinuity in a network of geographically located populations of western house mouse from the previously published mitochondrial DNA D-loop sequence datasets which we acquired from the NCBI GenBank database, we applied a computational geometry approach using the Monmonier’s maximum difference algorithm implemented in the BARRIER 2.2 software. We defined ten zones where genetic change among populations is locally increased, three of them occur within the Middle East, while seven occur in Europe. Analysis of molecular variance among post-hoc defined regions using the pattern generated by the BARRIER analysis showed that a significant portion of the genetic diversity was because of among groups component.

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Published

2016-06-20

How to Cite

Zones of maximum discontinuity in the western house mouse (M. m. domesticus) genetic landscape: a computational geometry method. (2016). Journal of Zankoy Sulaimani - Part A, 18(2), 349-364. https://doi.org/10.17656/jzs.10526